A Multiplex PCR Assay for Simultaneous Discrimination of Two Predominant Spider Mites of the Genus Tetranychus (Acari: Tetranychidae) in Greenhouses of Iran

Authors
1 Department of Plant Protection, Faculty of Agriculture, Ferdowsi University of Mashhad, P. O. Box: 91779-48974, Islamic Republic of Iran.
2 Academic member of Ferdowsi University of Mashhad
Abstract
Molecular species identification has become more ubiquitous in diagnostics of insects, particularly in situations where morphological identification is a laborious or time-consuming process. Tetranychid mites are serious agricultural pests. Identification of tetranychid mites is usually arduous and requires a high level of taxonomic expertise because of their minute size, their close morphological similarities as well as limited number of diagnostic characters. Most species of the spider mites of the genus Tetranychus Dufour in Iran are morphologically similar, differing only in the diameter of the aedeagal knob in males. Because this genus contains many important pests, the unambiguous identification of species is crucial for effective pest management. In this study, a single-step multiplex Polymerase Chain Reaction (multiplex PCR) was used to discriminate two predominant spider mite species occurring in greenhouses in Iran: Tetranychus urticae Koch and Tetranychus turkestani (Ugarov and Nikolskii). The single-step multiplex PCR developed here, based on ITS regions, is rapid, reliable, sensitive and relatively simple. The entire identification protocol from DNA extraction to electrophoresis could be completed in four hours. Moreover, it is adequately simple to be implemented in any molecular laboratory.

Keywords

Subjects


1. Arbabi, M. and Singh, J. 2008. Biology of Stethorus punctillum, a Potential Predator of Tetranychus ludeni. Tunis J. Plant Prot., 3: 95-100.
2. Arimoto, M., Satoh, M., Uesugi, R. and Osakabe, M. 2013. PCR-RFLP Analysis for Identification of Tetranychus Spider Mite Species (Acari: Tetranychidae). J. Econ. Entomol., 106(2): 661-668.
3. Beyzavi, Gh., Ueckermann, E.A., Faraji, F. and Ostovan, H. 2013. A Catalog of Iranian Prostigmatic Mites of Superfamilies Raphignathoidea & Tetranychoidea (Acari). Persian J. Acarol., 2(3): 389-474.
4. Biddinger, D. J., Weber, D. C. and Hull, L. A. 2009. Coccinellidae as Predators of Mites: Stethorini in Biological Control. Biol. Control., 51: 268-283.
5. Carbonnelle, S. and Hance, T. 2004. Cuticular Lobes in the Tetranychus urticae Complex (Acari: Tetranychidae): A Reliable Taxonomic Character? Belg. J. Zool., 134: 51-54.
6. Daane, K. M., Middleton, M. C., Sforza, R., Cooper, M. L., Alton, V. M., Walsh, D. B., Zaviezo, T. and Almeida, R. P. 2011. Development of a Multiplex PCR for Identification of Vineyard Mealybugs. Environ. Entomol., 40(6): 1595-1603.
7. Folmer, O., Black, M., Hoeh, W., Lutz, R. and Vrijenhoek, R. 1994. DNA Primers for Amplification of Mitochondrial Cytochrome C Oxidase Subunit I from Diverse Metazoan Invertebrates. Mol. Mar. Biol. Biotechnol., 3(5): 294-299.
8. Gotoh, T., Araki, R., Boubou, A., Migeon, A., Ferragut, F. and Navajas, M. 2009. Evidence of Co-Specificity between Tetranychus evansi and Tetranychus takafujii (Acari: Prostigmata, Tetranychidae): Comments on Taxonomic and Agricultural Aspects. Int. J. Acarol., 35: 485-501.
9. Grafton-Cardwell, E. E., Granett, J. and Leigh, T. F. 2014. Spider Mite Species (Acari: Tetranychidae) Response to Propargite: Basis for an Acaricide Resistance Management Program. J. Econ. Entomol., 80(3): 579-587.
10. Hurtado, M. A., Ansaloni, T., Cros-Arteil, S., Jacas, J. A. and Navajas, M. 2008. Sequence Analysis of the Ribosomal Internal Transcribed Spacer Region in Spider Mites (Prostigmata: Tetranychidae) Occurring in Citrus Orchards in Eastern Spain: Use of Species Discrimination. Ann. App. Biol., 153(2): 167-174.
11. Imani, Z., Shishehbor, P. and Sohrabi, F. 2009. The effect of Tetranychus turkestani and Eutetranychus orientalis (Acari: Tetranychidae) on the Development and Reproduction of Stethorus gilvifrons (Coleoptera: Coccinellidae). J. Asia Pac. Entomol., 12: 213-216.
12. Khanjani, M. and Haddad Irani-Nejad, K. 2009. Injurious Mites of Agricultural Crops in Iran. 2nd Edition. Bu-Ali Sina University Press, 526 PP. (in Persian)
13. Kheradmand, K., Beynaghi, S., Asgari, S. and Sheykhi Garjan, A. 2015. Toxicity and Repellency Effects of Three Plant Essential Oils Against Two-Spotted Spider Mite, Tetranychus urticae (Acari: Tetranychidae). J. Agr. Sci. Tech., 17: 1223-1232.
14. Lava Kumar, P., Fenton, B. and Jones, A. T. 1999. Identification of Cecidophyopsis Mites (Acari: Eriophyidae) Based on Variable Simple Sequence Repeats of Ribosomal DNA Internal Transcribed Spacer-1 Sequences via Multiplex PCR. Insect Mol. Biol., 8(3): 347-357.
15. Lee, W., Otsuki, A. and Akimoto, S. I. 2013. Rapid Diagnostic Method for Discriminating Two Types of COI Sequences in the Gall-forming Aphid Tetraneura nigriabdominalis (Hemiptera: Aphididae) by Multiplex Polymerase Chain Reaction. Entomol. Sci., 16: 243-247.
16. Li, D., Fan, Q. -H., Waite, D. W., Gunawardana, D., George, S. and Kumarasinghe, L. 2015. Development and Validation of a Real-Time PCR Assay for Rapid Detection of Two-Spotted Spider Mite, Tetranychus urticae (Acari: Tetranychidae). Plos One., 10(7): e0131887.
17. Matsuda, T., Fukumoto, C., Hinomoto, N. and Gotoh, T. 2013. DNA-based Identification of Spider Mites: Molecular Evidence for Cryptic Species of the Genus Tetranychus (Acari: Tetranychidae). J. Econ. Entomol., 106(1): 463-472.
18. Matsuda, T., Morishita, M., Hinomoto, N. and Gotoh, T. 2014. Phylogenetic Analysis of the Spider Mite Sub-Family Tetranychinae (Acari: Tetranychidae) Based on the Mitochondrial COI Gene and the 18S and the 5′ End of the 28S rRNA Genes Indicates that Several Genera are Polyphyletic. Plos One., 9(10): e108672.
19. Navajas, M. and Boursot, P. 2003. Nuclear Ribosomal DNA Monophyly versus Mitochondrial DNA Polyphyly in Two Closely Related Mite Species: The Influence of Life History and Molecular Drive. Proc. R. Soc. Lond B (Supplement), 270: S124-S127.
20. Osakabe, M., Hirose, T. and Sato, M. 2002. Discrimination of Four Japanese Tetranychus Species (Acari: Tetranychidae) Using PCR-RFLP of the Inter-transcribed Spacer Region of Nuclear Ribosomal DNA. Appl. Entomol. Zool., 37: 399-407.
21. Pérez-Sayas, C., Pina, T., Gómez-Martínez, M. A., Camañes, G., Ibañez-Gual, M., Jaques, J. A. and Hurtado, M.A. 2015. Disentangling Mite Predator-prey Relationships by Multiplex PCR. Mol. Ecol. Resour., 15(6): 1330-1345.
22. Ros, V. I. and Breeuwer, J. A. 2007. Spider Mite (Acari: Tetranychidae) Mitochondrial COI Phylogeny Reviewed: Host Plant Relationships, Phylogeography, Reproductive Parasites and Barcoding. Exp. Appl. Acarol., 42(4): 239-62.
23. Sabelis, M. W. 1991. The Acari: Reproduction, Development and Life-History Strategies. 2. “Life-History Evolution of Spider Mites”. Chapman and Hall, London, PP.23-50.
24. Saccaggi, D. L., Krüger, K. and Pietersen, G. 2008. A Multiplex PCR Assay for the Simultaneous Identification of Three Mealybug Species (Hemiptera: Pseudococcidae). B. Entomol. Res., 98: 27-33.
25. Sepasgozarian, H. 1977. The 20 Years Research of Acarology in Iran. J. Iran. Soc. Eng., 56: 40-50.
26. Sint, D., Niederklapfer, B., Kaufmann, R. and Traugott, M. 2014. Group-Specific Multiplex PCR Detection Systems for the Identification of Flying Insect Prey. Plos One., 9(12): e115501.
27. Thet-Em, T., Tungtrongchitr, A., Tiewcharoen, S. and Malainual, N. 2012. Multiplex PCR for Identifying Common Dust Mites Species (Dermatophagoides pteronyssinus, Dermatophagoides farinae and Blomia tropicalis). Asian Pac. J. Allergy Immunol., 30(3): 224-30.
28. Van Leeuwen, T., Vontas, J., Tsagkarakou, A. and Tirry, L. 2009. Mechanisms of Acaricide Resistance in the Two Spotted Spider Mite Tetranychus urticae. In: “Biorational Control of Arthropod Pests”, (Eds.): Ishaaya, I. and Horowitz, A. R. Springer, The Netherlands, PP. 347-393.
29. Wauthy, G., Noti, M. I., Leponce, M. and Bauchau, V. 1998. Taxy and Variations of Leg Setae and Solenidia in Tetranychus urticae (Acari, Prostigmata). Acarologia., 39: 233-255.
30. Zhang, Z. Q. and Jacobson, R. J. 2000. Using Adult Female Morphological Characters for Differentiating Tetranychus urticae Complex (Acari: Tetranychidae) From Greenhouse Tomato Crops in UK. Syst. Appl. Acarol., 5: 69-76.