Characterization of Iranian Accessions of Aegilpos crassa Boiss. Using Flow Cytometry and Protein Analysis

Authors
1 Department of Agronomy and Plant Breeding, College of Agriculture, University of Tehran, Karaj,
2 Faculty of Agriculture, Food and Natural Resources, The University of Sydney, Australia.
3 Seed and Plant Improvement Institute, Karaj, Islamic Republic of Iran.
4 Department of Agronomy and Plant Breeding, College of Agriculture, University of Tehran, Karaj, Islamic Republic of Iran.
Abstract
In this study, 120 accessions of Aegilops crassa collected from various geographical areas of Iran were analyzed with respect to genome size and protein markers. A flow cytometry survey of these accessions revealed that one hundred and thirteen of the accessions were tetraploid and seven were hexaploid. Moreover, these accessions revealed variations in high molecular weight glutenin subunit compositions. In most accessions, subunits showing electrophoretic mobility similar to that of Dy12 were present. Eleven allelic variants were observed in Glu-D1 locus with the highest (30.90%) and the lowest allele (0.5%) frequencies in 3+12 and 2+10 variants, respectively. Among 17 bands selected for MALDI-TOF-TOF-MS analysis only 6 bands were identified with high probability and 11 of them had no MS/MS data. The results showed that Iranian accessions of Ae. crassa formed an interesting source of favorable glutenin subunits that might be very desirable in breeding programs for improving bread wheat quality.

Keywords


1. Amiour, N., Merlino, M., Leroy, P. and Branlard, G. 2003. Proteomic Analysis of Amphiphilic Proteins of Hexaploid Wheat Kernels. Proteomics, 2: 632-641.
2. Badaeva, E. D., Friebe, B., Zoshchuk, S. A., Zelenin, A. V. and Gill, B. S. 1998. Molecular Cytogenetic Analysis of Tetraploid and Hexaploid Aegilops crassa. Chromosome Res., 6: 629-637.
3. Bunce, N. A. C., White, R. P. and Shewry, P. R. J. 1985. Variation in Estimates of Molecular Weights of Cereal Prolamins by SDS-PAGE. J. Cereal Sci., 3: 131-142.
4. Ciaffi, M., Dominici, L., Umana, E., Tanzarella, O. A. and Porceddu, E. 2000. Restriction Fragment Length Polymorphism (RFLP) for Protein Disulfide Isomerase (PDI) Gene Sequences in Triticum and Aegilops Species. Theor. Appl. Genet., 101: 220–226.
5. Dumur, J., Branlard, G., Tanguy, A. M., Branlard, M., Coriton, O., Huteau, V., Lemoine, J. and Jahier, J. 2009. Homoeologous Recombination within Bread Wheat to Develop Novel Combinations of HMW-GS Genes: Transfer of the Glu-A1 Locus to Chromosome 1D. Planta, 231: 57–65.
6. Dworschak, R. G., Werner, E., Kenneth, G., Standing, Preston, K. R., Brian, A. M., Lafiandra, D., Masct, S., Dovidio, R., Tanzarella, O. A., Porceddu, E. and Margiotta, B. 1992. Relationship between the D Genome of Hexaploid Wheats (AABBDD) and Ae. squarrosa as Deduced by Seed Storage Proteins and Molecular Marker Analyses. Herediras, 116: 233-238.
7. Dworschak, R. G., Werner, E., Kenneth, G., Standing, Preston, K. R., Marchylo, B. A., Nightingale, M. J. and Stevenson, S. G. 1998. Analysis of Wheat Gluten Proteins by Matrix-assisted Laser Desorption/Ionisation Mass Spectrometry. J.Mass Spectrom. 33:429-435.
8. Eilam, T., Anikster, Y., Millet, E., Manisterski, J., Sagi-Assif, O. and Feldman, M. 2007. Nuclear DNA Amount in Diploid Triticeae Species. Genome, 50: 1029–1037.
9. Galbraith, D. W., Harkins, K. R., Maddox J. M., Ayres, N. M., Sharma, D. P. and Firoozabady, E. 1983. Rapid Flow Cytometric Analysis of the Cell-cycle in Intact Plant-tissues. Sci., 220: 1049– 1051.
10. Kantartzi, S. K. and Roupakias, D. G. 2010. Study of Apomictic Seed Formation in Interspecific Gossypium barbadense×Gossypium hirsutum, Cotton Hybrids. Int. J. Bot. 6: 164-169.
11. Kihara, H., Yamashita, K. and Tanaka, M. 1965. Morphological, Physiological, Geographical and Cytological Studies in Aegilops and Triticum Collected in Pakistan, Afghanistan and, Iran. In: "Cultivated Plants and Their Relatives", (Ed.): Yamashita K, Koei Printing Comp Japan, PP. 1–118.
12. Kole, C. 2011. Wild Crop Relatives: Genomic and Breeding Resources: Cereals. Springer Press. PP.522.
13. Lee, J. H., Ma, Y., Wako, T., Li, L.C., Kim, K. Y., Uchiyama, S. S. and Fukui, K. 2004. Flow Karyotypes and Chromosomal DNA Contents of Genus Triticum Species and Rye (Secale cereale). Chromosome Res. 12: 93–102.
14. Naghavi, M. R., Ranjbar, M., Aghaei, M. J., Mardi, M., Zali, A. and Pirseyedi, S. M. 2009. Genetic Diversity of Aegilops crassa and Its Relationship with Aegilops tauschii and the D Genome of Wheat. Cereal Res. Commun., 37: 159-167.
15. Nakamura, K. 2003. The Transmission Route through which the Common Wheat Has Reached the Far-East Japan. In: "The Gluen Proteins", (Eds.): Lafiandra, D., Masci, S. and Dovidio, R.. Athenaeum Press Ltd, UK, PP.93-96
16. Payne, P. I. and Lawrence, G. J. 1983. Catalogue of Alleles for the Complex Gene Loci, Glu-A1, Glu-B1 and Glu-D1 which Code for High-molecular Weight Subunits of Glutenin in Hexaploid Wheat. Cereal Res. Commun., 11: 29–35.
17. Payne, P. I., Corfield, K. G. and Blackman, J. A. 1981. Correlation between the Inheritance of Certain High-molecularweight Subunits of Glutenin and Bread-making Quality in Progenies of Six Crosses of Bread Wheat. J. Sci. Food Agric., 32: 51–60.
18. Peng, Z., Wang, M., Li, F., Lv, H., Li, C. and Xia, G. 2009. A proteomic Study of the Response to Salinity and Drought Stress in an Introgression Strain of Bread Wheat. Mol. Cell. Proteomics, 8: 2676-2686.
19. Petersen, G., Seberg, O., Yde, M. and Berthelsen, K. 2006. Phylogenetic Relationships of Triticum and Aegilops and Evidence for the Origin of the A, B, and D Genomes of Common Wheat (Triticum aestivum). Mol. Phylogenet. Evo. 39: 70–82.
20. Ram, S. 2003. High Molecular Weight Glutenin Subunit Composition of Indian Wheats and Their Relationships with Dough Strength. Plan. Bioc. Biot., 12: 151-155.
21. Ranjbar, M., Naghavi, M. R., Zali, A. and Agahei, M. J. 2007. Multivariate Analysis of Morphological Variation in Accessions of Aegilops crassa from Iran. Pak. J. Biol. Sci., 10: 1126- 1129.
22. Ruili, X., Yongfang, W., Yan, Z. and Daowen, W. 2001. HMW Glutenin Subunits in Multiploid Aegilops Species: Composition Analysis and Molecular Cloning of Coding Sequences. Chin. Sci. Bull. 46: 309-313.
23. Seilmeier, W., Belitz, H. D. and Wieser, H. 1991. Separation and Quantitative Determination of High-molecular Weight Subunits of Glutenin from Different Wheat Varieties and Genetic Variants of the Variety Sicco. Z. Lebensm. Unters. Forsch., 192:124-129.
24. Upadhya, M. D. and Swaminathan, M. S. 1963. Deoxyribonucleic Acid and the Ancestry of Wheat. Nature (London), 200: 713–714.